Welcome to ncfp’s documentation!

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If you’re feeling impatient, please head over to the QuickStart Guide

Description

ncfp is a program and Python package that, given a set of protein sequences with appropriate identifier values, retrieves corresponding coding nucleotide sequences from the NCBI nucleotide databases. This is useful, for instance, to help backthread coding sequences onto protein alignments for phylogenetic analyses.

Reporting problems and requesting improvements

If you encounter bugs or errors, or would like to suggest ways in which ncfp can be improved, please raise a new issue at the ncfp GitHub issues page.

If you’d like to fix a bug or make an improvement yourself, contributions are welcomed, and guidelines on how to do this can be found at the Contributing documentation page.