Installation¶
ncfp
can be installed in any of several ways.
Using pip
¶
The most recent release of ncfp
is available at the PyPI warehouse, and can be installed using pip
:
pip install ncfp
Using bioconda
¶
ncfp
is available through the bioconda channel of the conda package management system. To install
ncfp
, you will need Anaconda or miniconda, and to set up the bioconda
channel. Then you can use
the conda install ncfp
command to install the package:
conda install -c bioconda ncfp
Alternatively:
conda config --add channels defaults
conda config --add channels conda-forge
conda config --add channels bioconda
conda install ncfp
From source (most recent release)¶
ncfp
releases are available at the GitHub releases page. To install from source:
- Download the .tar.gz or .zip file containing the package (click the link, use
curl
orwget
). - Uncompress the archive.
- Change to the newly-expanded directory.
- Install Python module requirements with
pip
. - Install
ncfp
withsetup.py
$ wget https://github.com/widdowquinn/ncfp/archive/v0.2.0.tar.gz
$ tar -zxvf v0.2.0.tar.gz
$ cd ncfp
$ pip install -r requirements.txt
$ python setup.py install
From source (bleeding edge)¶
To get the very latest development version of ncfp
, you can clone the repository from the GitHub project page
- Clone the repository from
git@github.com:widdowquinn/ncfp.git
- Change to the repository root directory.
- Install Python module requirements with
pip
. - Install
ncfp
withsetup.py
$ git clone git@github.com:widdowquinn/ncfp.git
$ cd ncfp
$ pip install -r requirements.txt
$ pip install -e . # for development installation
$ python setup.py install # for installation as a package/script